BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C11LP1|AL429043
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1748 0.0
3x_Contig66 111 2e-24
>3x_Contig1530
Length = 6216
Score = 1748 bits (881), Expect = 0.0
Identities = 895/899 (99%), Gaps = 1/899 (0%)
Strand = Plus / Plus
Query: 1 gatcaacttagaactggtacggacaaggggaatctgactgtctaattaaaacatagcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4131 gatcaacttagaactggtacggacaaggggaatctgactgtctaattaaaacatagcatt 4190
Query: 61 gcgatggtcwgaaagtgatgttgacgcaatgtgatttctgcccagtgctctgaatgtcaa 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4191 gcgatggtcagaaagtgatgttgacgcaatgtgatttctgcccagtgctctgaatgtcaa 4250
Query: 121 agtgaagaaattcaaccaagcgcgggtaaacggcgggagttactatgactctcttaaggt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4251 agtgaagaaattcaaccaagcgcgggtaaacggcgggagtaactatgactctcttaaggt 4310
Query: 181 agccaaatgcctcgtcatctaattagtgacgcgcatgaatggattaacgagattcccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4311 agccaaatgcctcgtcatctaattagtgacgcgcatgaatggattaacgagattcccact 4370
Query: 241 gtccctatctactatctagcgaaaccacagccaagggaacgggcttggcagaatcagcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4371 gtccctatctactatctagcgaaaccacagccaagggaacgggcttggcagaatcagcgg 4430
Query: 301 ggaaagaagaccctgttgagcttgactctagtttgacattgtgaagagacatagagggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4431 ggaaagaagaccctgttgagcttgactctagtttgacattgtgaagagacatagagggtg 4490
Query: 361 tagcataagtgggagcttcggcgccagtgaaataccactacctttatagtttctttactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4491 tagcataagtgggagcttcggcgccagtgaaataccactacctttatagtttctttactt 4550
Query: 421 attcaattaagcggagctggnaattcattttccacgttctagcattcaaagtcctatacg 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4551 attcaattaagcggagctgg-aattcattttccacgttctagcattcaaagtcctatacg 4609
Query: 481 ggctgatccgggttgaagacattgtcaggtggggagtttggctggggcggcacatctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4610 ggctgatccgggttgaagacattgtcaggtggggagtttggctggggcggcacatctgtt 4669
Query: 541 aaacgataacgcagatgtcctaagggggactcatggagaacagaaatctccagtagaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4670 aaacgataacgcagatgtcctaagggggactcatggagaacagaaatctccagtagaaca 4729
Query: 601 aaagggtaaaagtccccttgattttgattttcagtgtgaatacaaaccatgaaagtgtgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730 aaagggtaaaagtccccttgattttgattttcagtgtgaatacaaaccatgaaagtgtgg 4789
Query: 661 cctatcgatcctttaggtcctcggaatttgaggctagaggtgccagaaaagttaccacag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4790 cctatcgatcctttaggtcctcggaatttgaggctagaggtgccagaaaagttaccacag 4849
Query: 721 ggataactggcttgtggcagtcaagcgttcatagcgacattgctttttgattcttcgatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4850 ggataactggcttgtggcagtcaagcgttcatagcgacattgctttttgattcttcgatg 4909
Query: 781 tcggctcttcctatcataccgaagcagaattcggtaagcgttggattgttcacccactaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4910 tcggctcttcctatcataccgaagcagaattcggtaagcgttggattgttcacccactaa 4969
Query: 841 tagggaacgtgagctgggtttagaccgtcgtgagaaaggttagttttaccctactgatg 899
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4970 tagggaacgtgagctgggtttagaccgtcgtgagacaggttagttttaccctactgatg 5028
>3x_Contig66
Length = 1023
Score = 111 bits (56), Expect = 2e-24
Identities = 63/64 (98%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 1 gatcaacttagaactggtacggac-aaggggaatctgactgtctaattaaaacatagcat 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 67 gatcaacttagaactggtacggaccaaggggaatctgactgtctaattaaaacatagcat 8
Query: 60 tgcg 63
||||
Sbjct: 7 tgcg 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4309
Number of Sequences: 1807
Number of extensions: 4309
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 2
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)